Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
APH1AQ96BI3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
APH1AQ96BI3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC012640.2-201ENST00000561606 901 ntBASIC15.28■□□□□ 0.04
APH1AQ96BI3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AL356488.2-201ENST00000602755 427 ntBASIC15.28■□□□□ 0.04
APH1AQ96BI3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC116407.3-201ENST00000623905 1129 ntBASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC005593.1-201ENST00000624894 515 ntBASIC15.28■□□□□ 0.04
APH1AQ96BI3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
APH1AQ96BI3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
APH1AQ96BI3 AP002414.3-201ENST00000589352 1468 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 AC243591.1-201ENST00000452967 1364 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 AC005332.8-201ENST00000622750 2735 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
APH1AQ96BI3 ELK2BP-201ENST00000415014 1224 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 AL590627.1-203ENST00000421194 1026 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 KRT18P27-201ENST00000427733 1299 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.27■□□□□ 0.04
APH1AQ96BI3 AC120114.3-201ENST00000611923 658 ntBASIC15.27■□□□□ 0.04
APH1AQ96BI3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
APH1AQ96BI3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
APH1AQ96BI3 GPR89P-201ENST00000407924 1495 ntBASIC15.27■□□□□ 0.03
APH1AQ96BI3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
APH1AQ96BI3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.27■□□□□ 0.03
APH1AQ96BI3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
APH1AQ96BI3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
APH1AQ96BI3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
APH1AQ96BI3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms