Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSD4Q8NDX1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PSD4Q8NDX1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
PSD4Q8NDX1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSD4Q8NDX1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSD4Q8NDX1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSD4Q8NDX1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 FDX1P1-201ENST00000449115 551 ntBASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AF238378.1-201ENST00000526806 358 ntBASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.34■□□□□ 0.21
PSD4Q8NDX1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.34■□□□□ 0.21
PSD4Q8NDX1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.33■□□□□ 0.21
PSD4Q8NDX1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.33■□□□□ 0.21
PSD4Q8NDX1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSD4Q8NDX1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
PSD4Q8NDX1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSD4Q8NDX1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSD4Q8NDX1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSD4Q8NDX1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 AC009078.2-202ENST00000463353 338 ntBASIC16.33■□□□□ 0.2
PSD4Q8NDX1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 AP002469.2-201ENST00000531724 424 ntBASIC16.33■□□□□ 0.2
PSD4Q8NDX1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSD4Q8NDX1 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
PSD4Q8NDX1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PSD4Q8NDX1 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSD4Q8NDX1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSD4Q8NDX1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSD4Q8NDX1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PSD4Q8NDX1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms