Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 HCG4-201ENST00000418983 998 ntBASIC26.7■■□□□ 1.86
VPS8Q8N3P4 AP006288.1-201ENST00000446065 395 ntBASIC26.7■■□□□ 1.86
VPS8Q8N3P4 AC074386.1-202ENST00000463561 864 ntBASIC26.7■■□□□ 1.86
VPS8Q8N3P4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 AP002472.1-201ENST00000577490 586 ntBASIC26.7■■□□□ 1.86
VPS8Q8N3P4 MIR4515-201ENST00000584082 81 ntBASIC26.7■■□□□ 1.86
VPS8Q8N3P4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 AC092902.6-201ENST00000641783 218 ntBASIC26.7■■□□□ 1.86
VPS8Q8N3P4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
VPS8Q8N3P4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 HMGA1P7-201ENST00000406908 502 ntBASIC26.69■■□□□ 1.86
VPS8Q8N3P4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
VPS8Q8N3P4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 AC112482.1-201ENST00000492080 688 ntBASIC26.68■■□□□ 1.86
VPS8Q8N3P4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 AL031432.2-201ENST00000566714 459 ntBASIC26.68■■□□□ 1.86
VPS8Q8N3P4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 AL928711.1-201ENST00000570165 459 ntBASIC26.68■■□□□ 1.86
VPS8Q8N3P4 MPDU1-223ENST00000582151 728 ntBASIC26.68■■□□□ 1.86
VPS8Q8N3P4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
VPS8Q8N3P4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 TUBB8P12-201ENST00000308911 1335 ntBASIC26.67■■□□□ 1.86
VPS8Q8N3P4 TUBB7P-202ENST00000428444 1305 ntBASIC26.67■■□□□ 1.86
VPS8Q8N3P4 TUBB8P7-204ENST00000567960 1332 ntBASIC26.67■■□□□ 1.86
VPS8Q8N3P4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 FAM58CP-201ENST00000435741 640 ntBASIC26.67■■□□□ 1.86
VPS8Q8N3P4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 MIR3909-201ENST00000579518 119 ntBASIC26.67■■□□□ 1.86
VPS8Q8N3P4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 ELL2P1-201ENST00000413990 1906 ntBASIC26.67■■□□□ 1.86
VPS8Q8N3P4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
VPS8Q8N3P4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 AC092068.3-201ENST00000587894 2016 ntBASIC26.66■■□□□ 1.86
VPS8Q8N3P4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 AC004967.1-201ENST00000453589 447 ntBASIC26.66■■□□□ 1.86
VPS8Q8N3P4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 GPALPP1-207ENST00000611650 899 ntBASIC26.66■■□□□ 1.86
VPS8Q8N3P4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 AL021920.2-201ENST00000624828 1351 ntBASIC26.66■■□□□ 1.86
VPS8Q8N3P4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
VPS8Q8N3P4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms