Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT39Q6A163 AL121761.2-201ENST00000598007 1648 ntBASIC18.61■□□□□ 0.57
KRT39Q6A163 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
KRT39Q6A163 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.61■□□□□ 0.57
KRT39Q6A163 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.61■□□□□ 0.57
KRT39Q6A163 AC021087.4-201ENST00000563761 564 ntBASIC18.61■□□□□ 0.57
KRT39Q6A163 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT39Q6A163 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
KRT39Q6A163 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT39Q6A163 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT39Q6A163 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.6■□□□□ 0.57
KRT39Q6A163 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT39Q6A163 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
KRT39Q6A163 AC025062.2-201ENST00000605477 670 ntBASIC18.6■□□□□ 0.57
KRT39Q6A163 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
KRT39Q6A163 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 AC022211.2-201ENST00000585075 2527 ntBASIC18.6■□□□□ 0.57
KRT39Q6A163 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
KRT39Q6A163 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT39Q6A163 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT39Q6A163 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.59■□□□□ 0.57
KRT39Q6A163 KRT126P-201ENST00000549467 1181 ntBASIC18.59■□□□□ 0.57
KRT39Q6A163 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.59■□□□□ 0.57
KRT39Q6A163 AC139887.3-201ENST00000568585 713 ntBASIC18.59■□□□□ 0.57
KRT39Q6A163 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 RN7SL510P-201ENST00000581311 263 ntBASIC18.59■□□□□ 0.57
KRT39Q6A163 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 AL121912.1-201ENST00000603683 238 ntBASIC18.59■□□□□ 0.57
KRT39Q6A163 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.59■□□□□ 0.57
KRT39Q6A163 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.59■□□□□ 0.57
KRT39Q6A163 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
KRT39Q6A163 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms