Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF9P41273 PMS2P1-201ENST00000431037 1228 ntBASIC18.61■□□□□ 0.57
TNFSF9P41273 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.61■□□□□ 0.57
TNFSF9P41273 KRT18P2-201ENST00000447938 1258 ntBASIC18.61■□□□□ 0.57
TNFSF9P41273 AC087163.2-201ENST00000457299 853 ntBASIC18.61■□□□□ 0.57
TNFSF9P41273 SLC25A6P2-201ENST00000497974 877 ntBASIC18.61■□□□□ 0.57
TNFSF9P41273 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.61■□□□□ 0.57
TNFSF9P41273 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF9P41273 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.61■□□□□ 0.57
TNFSF9P41273 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 AC064836.3-201ENST00000607928 673 ntBASIC18.61■□□□□ 0.57
TNFSF9P41273 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF9P41273 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TNFSF9P41273 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.61■□□□□ 0.57
TNFSF9P41273 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TNFSF9P41273 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.61■□□□□ 0.57
TNFSF9P41273 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF9P41273 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TNFSF9P41273 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF9P41273 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF9P41273 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF9P41273 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF9P41273 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF9P41273 MRPL20P1-201ENST00000400819 433 ntBASIC18.6■□□□□ 0.57
TNFSF9P41273 IGLL3P-201ENST00000412472 434 ntBASIC18.6■□□□□ 0.57
TNFSF9P41273 AC027601.4-201ENST00000611259 610 ntBASIC18.6■□□□□ 0.57
TNFSF9P41273 GGTLC5P-201ENST00000617623 998 ntBASIC18.6■□□□□ 0.57
TNFSF9P41273 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.6■□□□□ 0.57
TNFSF9P41273 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TNFSF9P41273 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
TNFSF9P41273 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
TNFSF9P41273 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TNFSF9P41273 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TNFSF9P41273 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF9P41273 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.59■□□□□ 0.57
TNFSF9P41273 CRYGEP-201ENST00000412192 528 ntBASIC18.59■□□□□ 0.57
TNFSF9P41273 VN2R19P-201ENST00000442399 1052 ntBASIC18.59■□□□□ 0.57
TNFSF9P41273 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
TNFSF9P41273 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.59■□□□□ 0.57
TNFSF9P41273 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFSF9P41273 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF9P41273 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.59■□□□□ 0.57
TNFSF9P41273 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.59■□□□□ 0.57
TNFSF9P41273 LETM1P2-201ENST00000597330 2178 ntBASIC18.59■□□□□ 0.57
TNFSF9P41273 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TNFSF9P41273 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TNFSF9P41273 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.59■□□□□ 0.57
TNFSF9P41273 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TNFSF9P41273 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.59■□□□□ 0.57
TNFSF9P41273 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TNFSF9P41273 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TNFSF9P41273 BCL2-203ENST00000589955 5011 ntBASIC18.58■□□□□ 0.57
TNFSF9P41273 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF9P41273 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
TNFSF9P41273 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF9P41273 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF9P41273 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TNFSF9P41273 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TNFSF9P41273 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF9P41273 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.58■□□□□ 0.57
TNFSF9P41273 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TNFSF9P41273 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
TNFSF9P41273 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 HCG4B-203ENST00000450128 991 ntBASIC18.58■□□□□ 0.56
TNFSF9P41273 KRT18P3-201ENST00000451602 1288 ntBASIC18.58■□□□□ 0.56
TNFSF9P41273 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFSF9P41273 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.58■□□□□ 0.56
TNFSF9P41273 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.58■□□□□ 0.56
TNFSF9P41273 FAM197Y3-203ENST00000618346 717 ntBASIC18.58■□□□□ 0.56
TNFSF9P41273 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 AC026471.1-201ENST00000564629 3026 ntBASIC18.58■□□□□ 0.56
TNFSF9P41273 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
TNFSF9P41273 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.58■□□□□ 0.56
TNFSF9P41273 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TNFSF9P41273 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms