Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT2P35908 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT2P35908 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
KRT2P35908 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.76■□□□□ 0.75
KRT2P35908 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT2P35908 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KRT2P35908 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT2P35908 AC124947.2-201ENST00000547118 1133 ntBASIC19.76■□□□□ 0.75
KRT2P35908 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.76■□□□□ 0.75
KRT2P35908 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT2P35908 AL353135.1-201ENST00000606729 504 ntBASIC19.76■□□□□ 0.75
KRT2P35908 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.76■□□□□ 0.75
KRT2P35908 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KRT2P35908 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KRT2P35908 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT2P35908 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT2P35908 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT2P35908 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT2P35908 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT2P35908 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.75■□□□□ 0.75
KRT2P35908 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.75■□□□□ 0.75
KRT2P35908 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.75■□□□□ 0.75
KRT2P35908 AC021087.4-201ENST00000563761 564 ntBASIC19.75■□□□□ 0.75
KRT2P35908 AL589182.2-201ENST00000619332 1049 ntBASIC19.75■□□□□ 0.75
KRT2P35908 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
KRT2P35908 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT2P35908 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT2P35908 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT2P35908 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT2P35908 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 AL450487.1-201ENST00000426799 995 ntBASIC19.74■□□□□ 0.75
KRT2P35908 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 AC025062.2-201ENST00000605477 670 ntBASIC19.74■□□□□ 0.75
KRT2P35908 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.74■□□□□ 0.75
KRT2P35908 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.74■□□□□ 0.75
KRT2P35908 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KRT2P35908 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KRT2P35908 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT2P35908 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT2P35908 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KRT2P35908 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KRT2P35908 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms