Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC22.27■■□□□ 1.16
RXRBP28702 AC093726.1-201ENST00000608064 963 ntBASIC22.27■■□□□ 1.16
RXRBP28702 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC22.27■■□□□ 1.16
RXRBP28702 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RXRBP28702 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.27■■□□□ 1.15
RXRBP28702 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.15
RXRBP28702 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
RXRBP28702 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RXRBP28702 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC22.26■■□□□ 1.15
RXRBP28702 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC22.26■■□□□ 1.15
RXRBP28702 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC22.26■■□□□ 1.15
RXRBP28702 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.26■■□□□ 1.15
RXRBP28702 AC023310.3-201ENST00000557027 670 ntBASIC22.26■■□□□ 1.15
RXRBP28702 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC22.26■■□□□ 1.15
RXRBP28702 AC100756.1-201ENST00000562736 682 ntBASIC22.26■■□□□ 1.15
RXRBP28702 AC138749.3-201ENST00000567691 622 ntBASIC22.26■■□□□ 1.15
RXRBP28702 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC22.26■■□□□ 1.15
RXRBP28702 AC016629.1-201ENST00000596579 586 ntBASIC22.26■■□□□ 1.15
RXRBP28702 AL133215.2-201ENST00000609242 977 ntBASIC22.26■■□□□ 1.15
RXRBP28702 AC116165.1-201ENST00000611806 668 ntBASIC22.26■■□□□ 1.15
RXRBP28702 AL021578.1-201ENST00000613646 709 ntBASIC22.26■■□□□ 1.15
RXRBP28702 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC22.26■■□□□ 1.15
RXRBP28702 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC22.26■■□□□ 1.15
RXRBP28702 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.26■■□□□ 1.15
RXRBP28702 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC22.26■■□□□ 1.15
RXRBP28702 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RXRBP28702 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC22.26■■□□□ 1.15
RXRBP28702 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC22.25■■□□□ 1.15
RXRBP28702 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RXRBP28702 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.25■■□□□ 1.15
RXRBP28702 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 LBX2-201ENST00000341396 886 ntTSL 3 BASIC22.25■■□□□ 1.15
RXRBP28702 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC22.25■■□□□ 1.15
RXRBP28702 IGHJ2P-201ENST00000454480 60 ntBASIC22.25■■□□□ 1.15
RXRBP28702 KRT8P13-201ENST00000463294 1010 ntBASIC22.25■■□□□ 1.15
RXRBP28702 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
RXRBP28702 USP32P1-208ENST00000506594 1164 ntBASIC22.25■■□□□ 1.15
RXRBP28702 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 AC105021.1-202ENST00000570572 669 ntBASIC22.25■■□□□ 1.15
RXRBP28702 PIGL-212ENST00000581006 554 ntTSL 4 BASIC22.25■■□□□ 1.15
RXRBP28702 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
RXRBP28702 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.25■■□□□ 1.15
RXRBP28702 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RXRBP28702 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.24■■□□□ 1.15
RXRBP28702 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.24■■□□□ 1.15
RXRBP28702 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC22.24■■□□□ 1.15
RXRBP28702 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.24■■□□□ 1.15
RXRBP28702 AGER-203ENST00000375065 665 ntTSL 2 BASIC22.24■■□□□ 1.15
RXRBP28702 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC22.24■■□□□ 1.15
RXRBP28702 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC22.24■■□□□ 1.15
RXRBP28702 AL512361.1-201ENST00000554200 418 ntBASIC22.24■■□□□ 1.15
RXRBP28702 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.24■■□□□ 1.15
RXRBP28702 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RXRBP28702 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.24■■□□□ 1.15
RXRBP28702 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RXRBP28702 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RXRBP28702 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.23■■□□□ 1.15
RXRBP28702 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC22.23■■□□□ 1.15
RXRBP28702 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC22.23■■□□□ 1.15
RXRBP28702 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC22.23■■□□□ 1.15
RXRBP28702 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC22.23■■□□□ 1.15
RXRBP28702 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC22.23■■□□□ 1.15
RXRBP28702 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RXRBP28702 AC010319.3-201ENST00000597028 470 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms