Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.13■□□□□ 0.33
GABRB3P28472 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.13■□□□□ 0.33
GABRB3P28472 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.13■□□□□ 0.33
GABRB3P28472 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GABRB3P28472 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
GABRB3P28472 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.13■□□□□ 0.33
GABRB3P28472 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GABRB3P28472 AC099336.1-202ENST00000602961 463 ntBASIC17.13■□□□□ 0.33
GABRB3P28472 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.13■□□□□ 0.33
GABRB3P28472 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.13■□□□□ 0.33
GABRB3P28472 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 BCL2-203ENST00000589955 5011 ntBASIC17.13■□□□□ 0.33
GABRB3P28472 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GABRB3P28472 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.13■□□□□ 0.33
GABRB3P28472 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.13■□□□□ 0.33
GABRB3P28472 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GABRB3P28472 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 AL020989.1-201ENST00000422979 469 ntBASIC17.12■□□□□ 0.33
GABRB3P28472 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 ABCD1P5-201ENST00000445663 754 ntBASIC17.12■□□□□ 0.33
GABRB3P28472 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 AC091076.1-201ENST00000610741 619 ntBASIC17.12■□□□□ 0.33
GABRB3P28472 PCDHB19P-201ENST00000570871 2371 ntBASIC17.12■□□□□ 0.33
GABRB3P28472 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GABRB3P28472 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GABRB3P28472 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GABRB3P28472 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GABRB3P28472 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.12■□□□□ 0.33
GABRB3P28472 PCDHB17P-201ENST00000539533 2393 ntBASIC17.11■□□□□ 0.33
GABRB3P28472 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.11■□□□□ 0.33
GABRB3P28472 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GABRB3P28472 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 ARMC10P1-201ENST00000313754 855 ntBASIC17.11■□□□□ 0.33
GABRB3P28472 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
GABRB3P28472 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.11■□□□□ 0.33
GABRB3P28472 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 SIGLEC30P-201ENST00000455569 941 ntBASIC17.11■□□□□ 0.33
GABRB3P28472 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GABRB3P28472 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 AC073592.4-201ENST00000623827 446 ntBASIC17.11■□□□□ 0.33
GABRB3P28472 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 SIGLEC16-201ENST00000599858 1437 ntBASIC17.11■□□□□ 0.33
GABRB3P28472 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GABRB3P28472 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.11■□□□□ 0.33
GABRB3P28472 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB3P28472 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GABRB3P28472 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB3P28472 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GABRB3P28472 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms