Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.07■□□□□ 0.48
TRUB2O95900 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TRUB2O95900 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.07■□□□□ 0.48
TRUB2O95900 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TRUB2O95900 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.07■□□□□ 0.48
TRUB2O95900 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 FDX1P1-201ENST00000449115 551 ntBASIC18.07■□□□□ 0.48
TRUB2O95900 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.07■□□□□ 0.48
TRUB2O95900 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 OR7E14P-202ENST00000530490 1290 ntBASIC18.07■□□□□ 0.48
TRUB2O95900 AL662844.1-201ENST00000546340 181 ntBASIC18.07■□□□□ 0.48
TRUB2O95900 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.07■□□□□ 0.48
TRUB2O95900 AL589182.2-201ENST00000619332 1049 ntBASIC18.07■□□□□ 0.48
TRUB2O95900 AC107918.4-202ENST00000641623 219 ntBASIC18.07■□□□□ 0.48
TRUB2O95900 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRUB2O95900 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.07■□□□□ 0.48
TRUB2O95900 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRUB2O95900 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
TRUB2O95900 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 NCF1C-201ENST00000438382 1427 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 AC009053.2-201ENST00000563701 2365 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.06■□□□□ 0.48
TRUB2O95900 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.06■□□□□ 0.48
TRUB2O95900 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRUB2O95900 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRUB2O95900 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.06■□□□□ 0.48
TRUB2O95900 AL031284.1-201ENST00000419297 478 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 LAGE3P1-201ENST00000425356 484 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.06■□□□□ 0.48
TRUB2O95900 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRUB2O95900 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.06■□□□□ 0.48
TRUB2O95900 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.06■□□□□ 0.48
TRUB2O95900 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.06■□□□□ 0.48
TRUB2O95900 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.06■□□□□ 0.48
TRUB2O95900 AC139887.3-201ENST00000568585 713 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.06■□□□□ 0.48
TRUB2O95900 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.06■□□□□ 0.48
TRUB2O95900 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.06■□□□□ 0.48
TRUB2O95900 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.06■□□□□ 0.48
TRUB2O95900 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRUB2O95900 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRUB2O95900 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRUB2O95900 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRUB2O95900 AC092053.1-201ENST00000605787 1936 ntBASIC18.06■□□□□ 0.48
TRUB2O95900 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TRUB2O95900 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 LINC00982-205ENST00000420957 435 ntBASIC18.05■□□□□ 0.48
TRUB2O95900 ACTG1P4-201ENST00000425123 1122 ntBASIC18.05■□□□□ 0.48
TRUB2O95900 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.05■□□□□ 0.48
TRUB2O95900 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.05■□□□□ 0.48
TRUB2O95900 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.05■□□□□ 0.48
TRUB2O95900 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRUB2O95900 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRUB2O95900 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRUB2O95900 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms