Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX39AO00148 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX39AO00148 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
DDX39AO00148 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX39AO00148 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
DDX39AO00148 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
DDX39AO00148 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX39AO00148 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 KRT18P2-201ENST00000447938 1258 ntBASIC19.38■□□□□ 0.69
DDX39AO00148 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.38■□□□□ 0.69
DDX39AO00148 RNA5SP416-201ENST00000516838 111 ntBASIC19.38■□□□□ 0.69
DDX39AO00148 PGAM5P1-201ENST00000518923 814 ntBASIC19.38■□□□□ 0.69
DDX39AO00148 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX39AO00148 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX39AO00148 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 LINC00896-202ENST00000609602 2128 ntBASIC19.38■□□□□ 0.69
DDX39AO00148 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
DDX39AO00148 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX39AO00148 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX39AO00148 AC023274.1-201ENST00000418278 595 ntBASIC19.37■□□□□ 0.69
DDX39AO00148 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX39AO00148 AL591424.1-201ENST00000442569 1213 ntBASIC19.37■□□□□ 0.69
DDX39AO00148 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX39AO00148 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 AC092865.5-201ENST00000545435 363 ntBASIC19.37■□□□□ 0.69
DDX39AO00148 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.37■□□□□ 0.69
DDX39AO00148 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 AC018845.2-201ENST00000568326 409 ntBASIC19.37■□□□□ 0.69
DDX39AO00148 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 PP12613-201ENST00000424958 2230 ntBASIC19.37■□□□□ 0.69
DDX39AO00148 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.37■□□□□ 0.69
DDX39AO00148 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.37■□□□□ 0.69
DDX39AO00148 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
DDX39AO00148 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
DDX39AO00148 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
DDX39AO00148 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
DDX39AO00148 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 MRPL20P1-201ENST00000400819 433 ntBASIC19.36■□□□□ 0.69
DDX39AO00148 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 VN2R19P-201ENST00000442399 1052 ntBASIC19.36■□□□□ 0.69
DDX39AO00148 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms