Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC133963.1-201ENST00000504166 1679 ntBASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 AC073621.1-201ENST00000392730 636 ntBASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 STK19B-204ENST00000512515 211 ntBASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 RNA5SP416-201ENST00000516838 111 ntBASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 FZD10-202ENST00000539839 3282 ntBASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
NPIPA2E9PIF3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 REXO1L11P-201ENST00000620964 1927 ntBASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 LINC00304-203ENST00000565008 1864 ntBASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPIPA2E9PIF3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 AC005332.8-201ENST00000622750 2735 ntBASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 NCF1C-201ENST00000438382 1427 ntBASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 AC108751.1-201ENST00000490852 363 ntBASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 AC004706.3-202ENST00000621574 984 ntBASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
NPIPA2E9PIF3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 AC006504.4-201ENST00000592118 1568 ntBASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms