Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 AL008721.1-201ENST00000609964 604 ntBASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTCBQ9Y3I0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 AL353732.1-201ENST00000569618 1459 ntBASIC21.58■■□□□ 1.04
RTCBQ9Y3I0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 MEIS3P1-201ENST00000495167 958 ntBASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 SPDYE22P-201ENST00000582158 798 ntBASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 MIR4453-201ENST00000584019 89 ntBASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 AC025048.6-201ENST00000634326 1161 ntBASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RTCBQ9Y3I0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 OR8S1-201ENST00000310194 1080 ntBASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 PIN1P1-201ENST00000412108 996 ntBASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 MRPS18AP1-201ENST00000414458 589 ntBASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 AC007274.1-201ENST00000439805 662 ntBASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 AL662799.1-202ENST00000614205 422 ntBASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.56■■□□□ 1.04
RTCBQ9Y3I0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RTCBQ9Y3I0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 HCG4-201ENST00000418983 998 ntBASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 NME2P1-201ENST00000426182 414 ntBASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 AL596325.1-201ENST00000563991 1082 ntBASIC21.54■■□□□ 1.04
RTCBQ9Y3I0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms