Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HOXC10Q9NYD6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AC079140.1-201ENST00000508039 487 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AC243562.1-201ENST00000560672 389 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AC015911.4-201ENST00000588022 1070 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AL096865.1-201ENST00000606796 927 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AC012569.1-201ENST00000591191 1524 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 AL354751.1-201ENST00000412768 1863 ntBASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HOXC10Q9NYD6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 FAM86GP-201ENST00000448322 971 ntBASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 RARRES2P8-201ENST00000566335 367 ntBASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HOXC10Q9NYD6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 AC135050.7-201ENST00000624508 2218 ntBASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 AC069335.1-201ENST00000489972 472 ntBASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.62■□□□□ 0.73
HOXC10Q9NYD6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HOXC10Q9NYD6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms