Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.21■□□□□ 0.51
CD248Q9HCU0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 AL049840.3-201ENST00000602669 611 ntBASIC18.21■□□□□ 0.51
CD248Q9HCU0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
CD248Q9HCU0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.21■□□□□ 0.5
CD248Q9HCU0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 AF186996.4-201ENST00000467186 377 ntBASIC18.2■□□□□ 0.5
CD248Q9HCU0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.2■□□□□ 0.5
CD248Q9HCU0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.2■□□□□ 0.5
CD248Q9HCU0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CD248Q9HCU0 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 DOC2GP-204ENST00000639052 2548 ntBASIC18.19■□□□□ 0.5
CD248Q9HCU0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 PMS2P1-201ENST00000431037 1228 ntBASIC18.19■□□□□ 0.5
CD248Q9HCU0 KRT18P65-201ENST00000439811 1286 ntBASIC18.19■□□□□ 0.5
CD248Q9HCU0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 RNPS1P1-201ENST00000507437 918 ntBASIC18.19■□□□□ 0.5
CD248Q9HCU0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 GPALPP1-207ENST00000611650 899 ntBASIC18.19■□□□□ 0.5
CD248Q9HCU0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.19■□□□□ 0.5
CD248Q9HCU0 FAM215A-202ENST00000632077 792 ntBASIC18.19■□□□□ 0.5
CD248Q9HCU0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CD248Q9HCU0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms