Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRNKL1Q9BZJ0 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRNKL1Q9BZJ0 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRNKL1Q9BZJ0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CRNKL1Q9BZJ0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRNKL1Q9BZJ0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 UPF3AP3-201ENST00000420996 769 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 RHOQP3-201ENST00000437982 621 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 CXCL1P1-201ENST00000502804 216 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 AC010327.4-202ENST00000591484 748 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 MTDHP5-201ENST00000598980 586 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 EGFEM1P-202ENST00000431685 1563 ntBASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRNKL1Q9BZJ0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 AC093525.9-201ENST00000624961 1746 ntBASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 SLC25A1P3-201ENST00000395415 828 ntBASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 GPX1P2-201ENST00000429271 606 ntBASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 AL513190.1-201ENST00000621254 727 ntBASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 AC004877.2-201ENST00000623941 599 ntBASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.45■□□□□ 0.86
CRNKL1Q9BZJ0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 RPSAP43-201ENST00000402237 625 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 MCCD1P2-201ENST00000423228 335 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 FAM185BP-201ENST00000443595 716 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 MIR3687-2-201ENST00000577708 61 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 MIR3687-1-201ENST00000614492 61 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 BCAR1-209ENST00000546196 1340 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 AC129492.6-201ENST00000611383 1305 ntBASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRNKL1Q9BZJ0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 AC116353.5-201ENST00000638148 1699 ntBASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CRNKL1Q9BZJ0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms