Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
VRK1Q99986 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK1Q99986 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
VRK1Q99986 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK1Q99986 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.31■□□□□ 0.04
VRK1Q99986 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 BNIP3P18-201ENST00000593976 575 ntBASIC15.31■□□□□ 0.04
VRK1Q99986 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VRK1Q99986 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
VRK1Q99986 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 AL023806.1-201ENST00000603994 1649 ntBASIC15.31■□□□□ 0.04
VRK1Q99986 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VRK1Q99986 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
VRK1Q99986 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
VRK1Q99986 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 MST1L-201ENST00000442552 2185 ntBASIC15.31■□□□□ 0.04
VRK1Q99986 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
VRK1Q99986 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
VRK1Q99986 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
VRK1Q99986 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
VRK1Q99986 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
VRK1Q99986 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.3■□□□□ 0.04
VRK1Q99986 KRT18P65-201ENST00000439811 1286 ntBASIC15.3■□□□□ 0.04
VRK1Q99986 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.3■□□□□ 0.04
VRK1Q99986 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
VRK1Q99986 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.3■□□□□ 0.04
VRK1Q99986 AL160237.2-201ENST00000556165 472 ntBASIC15.3■□□□□ 0.04
VRK1Q99986 MIR5100-201ENST00000579544 119 ntBASIC15.3■□□□□ 0.04
VRK1Q99986 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.3■□□□□ 0.04
VRK1Q99986 AL121912.1-201ENST00000603683 238 ntBASIC15.3■□□□□ 0.04
VRK1Q99986 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
VRK1Q99986 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 AP001094.4-201ENST00000579008 2176 ntBASIC15.29■□□□□ 0.04
VRK1Q99986 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.29■□□□□ 0.04
VRK1Q99986 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.29■□□□□ 0.04
VRK1Q99986 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VRK1Q99986 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.29■□□□□ 0.04
VRK1Q99986 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
VRK1Q99986 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 FDX1P1-201ENST00000449115 551 ntBASIC15.29■□□□□ 0.04
VRK1Q99986 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 SAPCD2P3-201ENST00000455031 850 ntBASIC15.29■□□□□ 0.04
VRK1Q99986 AC009078.2-202ENST00000463353 338 ntBASIC15.29■□□□□ 0.04
VRK1Q99986 AC079776.4-201ENST00000511039 504 ntBASIC15.29■□□□□ 0.04
VRK1Q99986 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.29■□□□□ 0.04
VRK1Q99986 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.29■□□□□ 0.04
VRK1Q99986 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.29■□□□□ 0.04
VRK1Q99986 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms