Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB3IPQ96QF0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.89■□□□□ 0.3
RAB3IPQ96QF0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
RAB3IPQ96QF0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB3IPQ96QF0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 MIR600HG-201ENST00000449175 5984 ntBASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 AC124947.2-201ENST00000547118 1133 ntBASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 MTHFR-217ENST00000641820 1569 ntBASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB3IPQ96QF0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 KRT18P23-201ENST00000435622 1283 ntBASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 AC069152.1-201ENST00000438030 544 ntBASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 AC097658.1-201ENST00000475555 843 ntBASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 UNC93B4-201ENST00000505679 747 ntBASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 AC133041.1-202ENST00000642053 222 ntBASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RAB3IPQ96QF0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms