Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
COL21A1Q96P44 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 AC016396.2-201ENST00000562575 1417 ntBASIC16.35■□□□□ 0.21
COL21A1Q96P44 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL21A1Q96P44 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 POM121L3P-201ENST00000419331 1163 ntBASIC16.34■□□□□ 0.21
COL21A1Q96P44 AC007967.3-201ENST00000434308 558 ntBASIC16.34■□□□□ 0.21
COL21A1Q96P44 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 KRT18P56-201ENST00000507275 550 ntBASIC16.34■□□□□ 0.21
COL21A1Q96P44 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 AC096582.2-201ENST00000510860 516 ntBASIC16.34■□□□□ 0.21
COL21A1Q96P44 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL21A1Q96P44 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COL21A1Q96P44 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
COL21A1Q96P44 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.33■□□□□ 0.21
COL21A1Q96P44 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
COL21A1Q96P44 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL21A1Q96P44 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL21A1Q96P44 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL21A1Q96P44 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.33■□□□□ 0.21
COL21A1Q96P44 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL21A1Q96P44 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 NUS1P1-201ENST00000446295 882 ntBASIC16.33■□□□□ 0.2
COL21A1Q96P44 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 PRELID1P1-202ENST00000567272 903 ntBASIC16.33■□□□□ 0.2
COL21A1Q96P44 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 BNIP3P18-201ENST00000593976 575 ntBASIC16.33■□□□□ 0.2
COL21A1Q96P44 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.2
COL21A1Q96P44 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 TP73-AS1-210ENST00000637775 1455 ntBASIC16.33■□□□□ 0.2
COL21A1Q96P44 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL21A1Q96P44 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms