Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 AC096582.2-201ENST00000510860 516 ntBASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 STK25P1-201ENST00000585406 838 ntBASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 Z69720.1-201ENST00000601483 472 ntBASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 TP73-AS1-210ENST00000637775 1455 ntBASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 AC005915.1-201ENST00000624912 2018 ntBASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 DRAXINP1-201ENST00000437611 948 ntBASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 STK19B-204ENST00000512515 211 ntBASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AC011467.2-201ENST00000598425 242 ntBASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AL353593.2-201ENST00000602529 1483 ntBASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.3■□□□□ 0.04
LINC00346Q8IVM7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NSUN5P1-202ENST00000421140 1535 ntBASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NSUN5P2-203ENST00000457352 1529 ntBASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 KRT17P6-201ENST00000453795 1220 ntBASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 AC074051.2-201ENST00000565115 352 ntBASIC15.29■□□□□ 0.04
LINC00346Q8IVM7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms