Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTR9Q6PD62 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.47■□□□□ 0.87
CTR9Q6PD62 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 AC023511.2-201ENST00000618803 211 ntBASIC20.47■□□□□ 0.87
CTR9Q6PD62 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 PI4KAP1-204ENST00000612579 1703 ntBASIC20.47■□□□□ 0.87
CTR9Q6PD62 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.47■□□□□ 0.87
CTR9Q6PD62 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTR9Q6PD62 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 SLC25A1P3-201ENST00000395415 828 ntBASIC20.46■□□□□ 0.87
CTR9Q6PD62 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 PRSS29P-201ENST00000440800 595 ntBASIC20.46■□□□□ 0.87
CTR9Q6PD62 VN2R19P-201ENST00000442399 1052 ntBASIC20.46■□□□□ 0.87
CTR9Q6PD62 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.46■□□□□ 0.87
CTR9Q6PD62 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTR9Q6PD62 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.87
CTR9Q6PD62 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CTR9Q6PD62 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.45■□□□□ 0.86
CTR9Q6PD62 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CTR9Q6PD62 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CTR9Q6PD62 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.45■□□□□ 0.86
CTR9Q6PD62 CRYGEP-201ENST00000412192 528 ntBASIC20.45■□□□□ 0.86
CTR9Q6PD62 HCG4B-203ENST00000450128 991 ntBASIC20.45■□□□□ 0.86
CTR9Q6PD62 PAWRP1-201ENST00000451083 565 ntBASIC20.45■□□□□ 0.86
CTR9Q6PD62 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.45■□□□□ 0.86
CTR9Q6PD62 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.45■□□□□ 0.86
CTR9Q6PD62 MIR4751-201ENST00000578027 74 ntBASIC20.45■□□□□ 0.86
CTR9Q6PD62 GGTLC5P-201ENST00000617623 998 ntBASIC20.45■□□□□ 0.86
CTR9Q6PD62 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTR9Q6PD62 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 LINC00896-202ENST00000609602 2128 ntBASIC20.44■□□□□ 0.86
CTR9Q6PD62 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.44■□□□□ 0.86
CTR9Q6PD62 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTR9Q6PD62 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms