Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF43Q68DV7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF43Q68DV7 SIGLEC16-201ENST00000599858 1437 ntBASIC18.15■□□□□ 0.5
RNF43Q68DV7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF43Q68DV7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.14■□□□□ 0.5
RNF43Q68DV7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF43Q68DV7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 SCARNA2-201ENST00000458748 420 ntBASIC18.14■□□□□ 0.49
RNF43Q68DV7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 AC019129.2-201ENST00000609837 1235 ntBASIC18.14■□□□□ 0.49
RNF43Q68DV7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF43Q68DV7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF43Q68DV7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 AC079776.2-201ENST00000641154 1609 ntBASIC18.13■□□□□ 0.49
RNF43Q68DV7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.13■□□□□ 0.49
RNF43Q68DV7 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF43Q68DV7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
RNF43Q68DV7 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
RNF43Q68DV7 AC116407.2-201ENST00000613639 860 ntBASIC18.13■□□□□ 0.49
RNF43Q68DV7 MIR7706-201ENST00000613747 67 ntBASIC18.13■□□□□ 0.49
RNF43Q68DV7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF43Q68DV7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 AL356309.3-201ENST00000624132 1934 ntBASIC18.13■□□□□ 0.49
RNF43Q68DV7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF43Q68DV7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF43Q68DV7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF43Q68DV7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF43Q68DV7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 PMS2P2-201ENST00000425039 1128 ntBASIC18.12■□□□□ 0.49
RNF43Q68DV7 HNRNPDP1-201ENST00000439535 754 ntBASIC18.12■□□□□ 0.49
RNF43Q68DV7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 AC021087.4-201ENST00000563761 564 ntBASIC18.12■□□□□ 0.49
RNF43Q68DV7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 AC025062.2-201ENST00000605477 670 ntBASIC18.12■□□□□ 0.49
RNF43Q68DV7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms