Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HTRA3P83110 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.76■□□□□ 0.75
HTRA3P83110 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.76■□□□□ 0.75
HTRA3P83110 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 HINT2P1-201ENST00000419438 481 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.76■□□□□ 0.75
HTRA3P83110 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 KRT43P-201ENST00000434019 910 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 KRT18P34-201ENST00000488218 1270 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 RNA5SP412-201ENST00000516234 123 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 AP001889.1-201ENST00000525414 633 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 TPRX2P-201ENST00000535362 881 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 HNRNPUP1-201ENST00000554987 333 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 AC026740.1-201ENST00000607068 791 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.76■□□□□ 0.75
HTRA3P83110 AL033527.5-201ENST00000641382 801 ntBASIC19.76■□□□□ 0.75
HTRA3P83110 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.76■□□□□ 0.75
HTRA3P83110 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.76■□□□□ 0.75
HTRA3P83110 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.76■□□□□ 0.75
HTRA3P83110 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTRA3P83110 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.76■□□□□ 0.75
HTRA3P83110 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 AL080243.2-201ENST00000418783 582 ntBASIC19.75■□□□□ 0.75
HTRA3P83110 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.75■□□□□ 0.75
HTRA3P83110 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC19.75■□□□□ 0.75
HTRA3P83110 AL589987.1-201ENST00000453380 819 ntBASIC19.75■□□□□ 0.75
HTRA3P83110 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.75■□□□□ 0.75
HTRA3P83110 AL512361.1-201ENST00000554200 418 ntBASIC19.75■□□□□ 0.75
HTRA3P83110 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 AC015936.2-201ENST00000593177 259 ntBASIC19.75■□□□□ 0.75
HTRA3P83110 AC010319.3-201ENST00000597028 470 ntBASIC19.75■□□□□ 0.75
HTRA3P83110 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.75■□□□□ 0.75
HTRA3P83110 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.75■□□□□ 0.75
HTRA3P83110 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
HTRA3P83110 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.75■□□□□ 0.75
HTRA3P83110 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTRA3P83110 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTRA3P83110 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HTRA3P83110 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTRA3P83110 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.74■□□□□ 0.75
HTRA3P83110 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
HTRA3P83110 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTRA3P83110 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HTRA3P83110 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTRA3P83110 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTRA3P83110 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.74■□□□□ 0.75
HTRA3P83110 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.74■□□□□ 0.75
HTRA3P83110 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.74■□□□□ 0.75
HTRA3P83110 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC19.74■□□□□ 0.75
HTRA3P83110 AC005412.3-201ENST00000580309 715 ntBASIC19.74■□□□□ 0.75
HTRA3P83110 AL031055.1-201ENST00000606362 631 ntBASIC19.74■□□□□ 0.75
HTRA3P83110 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTRA3P83110 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.74■□□□□ 0.75
HTRA3P83110 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.74■□□□□ 0.75
HTRA3P83110 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
HTRA3P83110 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HTRA3P83110 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HTRA3P83110 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.73■□□□□ 0.75
HTRA3P83110 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTRA3P83110 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTRA3P83110 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTRA3P83110 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HTRA3P83110 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTRA3P83110 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HTRA3P83110 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HTRA3P83110 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTRA3P83110 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.73■□□□□ 0.75
HTRA3P83110 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTRA3P83110 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.73■□□□□ 0.75
HTRA3P83110 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.73■□□□□ 0.75
HTRA3P83110 ZNF890P-202ENST00000530367 1156 ntBASIC19.73■□□□□ 0.75
HTRA3P83110 BANF1P1-201ENST00000553684 263 ntBASIC19.73■□□□□ 0.75
HTRA3P83110 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.73■□□□□ 0.75
HTRA3P83110 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.73■□□□□ 0.75
HTRA3P83110 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.73■□□□□ 0.75
HTRA3P83110 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.73■□□□□ 0.75
HTRA3P83110 SRD5A3P1-201ENST00000603021 949 ntBASIC19.73■□□□□ 0.75
HTRA3P83110 TEX48-202ENST00000612244 662 ntTSL 3 BASIC19.73■□□□□ 0.75
HTRA3P83110 RPSAP52-203ENST00000622976 1023 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms