Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB28P51157 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAB28P51157 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB28P51157 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAB28P51157 AP002414.1-201ENST00000391405 1147 ntBASIC16.66■□□□□ 0.26
RAB28P51157 AC098831.1-202ENST00000438821 336 ntBASIC16.66■□□□□ 0.26
RAB28P51157 RPS15P9-201ENST00000494093 319 ntBASIC16.66■□□□□ 0.26
RAB28P51157 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB28P51157 BX640515.1-201ENST00000617215 977 ntBASIC16.66■□□□□ 0.26
RAB28P51157 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB28P51157 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.66■□□□□ 0.26
RAB28P51157 AC117500.6-201ENST00000624871 588 ntBASIC16.66■□□□□ 0.26
RAB28P51157 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB28P51157 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB28P51157 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RAB28P51157 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB28P51157 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB28P51157 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.66■□□□□ 0.26
RAB28P51157 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB28P51157 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB28P51157 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB28P51157 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAB28P51157 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB28P51157 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 PTCHD3P3-201ENST00000403073 906 ntBASIC16.65■□□□□ 0.26
RAB28P51157 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 AL590627.1-203ENST00000421194 1026 ntBASIC16.65■□□□□ 0.26
RAB28P51157 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB28P51157 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB28P51157 IGHV3-22-201ENST00000520721 359 ntBASIC16.65■□□□□ 0.26
RAB28P51157 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB28P51157 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB28P51157 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.65■□□□□ 0.26
RAB28P51157 IL9RP2-201ENST00000423948 1312 ntBASIC16.65■□□□□ 0.26
RAB28P51157 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.65■□□□□ 0.26
RAB28P51157 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RAB28P51157 FZD10-202ENST00000539839 3282 ntBASIC16.65■□□□□ 0.26
RAB28P51157 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAB28P51157 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.65■□□□□ 0.26
RAB28P51157 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
RAB28P51157 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
RAB28P51157 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAB28P51157 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RAB28P51157 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB28P51157 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB28P51157 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB28P51157 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB28P51157 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RAB28P51157 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB28P51157 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB28P51157 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
RAB28P51157 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RAB28P51157 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB28P51157 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms