Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HLA-DQB2P05538 OR6D1P-202ENST00000641007 5290 ntBASIC17.5■□□□□ 0.39
HLA-DQB2P05538 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 AC004870.1-201ENST00000315132 882 ntBASIC17.5■□□□□ 0.39
HLA-DQB2P05538 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 AL589182.2-201ENST00000619332 1049 ntBASIC17.5■□□□□ 0.39
HLA-DQB2P05538 AL031008.1-201ENST00000619963 541 ntBASIC17.5■□□□□ 0.39
HLA-DQB2P05538 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
HLA-DQB2P05538 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 AL139424.1-201ENST00000607572 797 ntBASIC17.49■□□□□ 0.39
HLA-DQB2P05538 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 GPR89P-201ENST00000407924 1495 ntBASIC17.49■□□□□ 0.39
HLA-DQB2P05538 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
HLA-DQB2P05538 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 AL590787.1-201ENST00000568856 1315 ntBASIC17.48■□□□□ 0.39
HLA-DQB2P05538 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 RPS2P1-201ENST00000434010 821 ntBASIC17.48■□□□□ 0.39
HLA-DQB2P05538 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.48■□□□□ 0.39
HLA-DQB2P05538 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms