Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ALDH1A1P00352 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.51■□□□□ 0.71
ALDH1A1P00352 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AP006294.1-201ENST00000415407 339 ntBASIC19.5■□□□□ 0.71
ALDH1A1P00352 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AC011495.1-201ENST00000498085 584 ntBASIC19.5■□□□□ 0.71
ALDH1A1P00352 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AL606495.2-201ENST00000605867 535 ntBASIC19.5■□□□□ 0.71
ALDH1A1P00352 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.5■□□□□ 0.71
ALDH1A1P00352 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AC087499.5-201ENST00000452760 1342 ntBASIC19.5■□□□□ 0.71
ALDH1A1P00352 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ALDH1A1P00352 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ALDH1A1P00352 AL020996.1-203ENST00000536896 2307 ntBASIC19.5■□□□□ 0.71
ALDH1A1P00352 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 AL035456.1-201ENST00000456064 1369 ntBASIC19.49■□□□□ 0.71
ALDH1A1P00352 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 ACA64.2-201ENST00000459014 129 ntBASIC19.49■□□□□ 0.71
ALDH1A1P00352 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
ALDH1A1P00352 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ALDH1A1P00352 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 AL391825.1-201ENST00000457671 1364 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 AL512384.1-201ENST00000406683 331 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 MIR1909-201ENST00000411312 80 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 AC087499.6-201ENST00000411576 835 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 INE1-201ENST00000456273 945 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 AC105233.2-201ENST00000523697 349 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 AF228730.5-201ENST00000530288 346 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 IGHV3-72-202ENST00000621503 303 ntBASIC19.48■□□□□ 0.71
ALDH1A1P00352 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ALDH1A1P00352 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ALDH1A1P00352 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms