Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
GPC4O75487 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
GPC4O75487 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
GPC4O75487 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GPC4O75487 NKILA-202ENST00000614771 2598 ntBASIC17.36■□□□□ 0.37
GPC4O75487 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
GPC4O75487 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.36■□□□□ 0.37
GPC4O75487 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.36■□□□□ 0.37
GPC4O75487 AC122714.2-201ENST00000502787 707 ntBASIC17.36■□□□□ 0.37
GPC4O75487 AC104819.1-201ENST00000504587 486 ntBASIC17.36■□□□□ 0.37
GPC4O75487 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.36■□□□□ 0.37
GPC4O75487 AC074051.2-201ENST00000565115 352 ntBASIC17.36■□□□□ 0.37
GPC4O75487 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
GPC4O75487 AC011467.2-201ENST00000598425 242 ntBASIC17.36■□□□□ 0.37
GPC4O75487 LINC01451-201ENST00000623792 534 ntBASIC17.36■□□□□ 0.37
GPC4O75487 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.36■□□□□ 0.37
GPC4O75487 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GPC4O75487 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.36■□□□□ 0.37
GPC4O75487 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
GPC4O75487 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
GPC4O75487 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.35■□□□□ 0.37
GPC4O75487 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 AC011676.5-201ENST00000624864 2660 ntBASIC17.35■□□□□ 0.37
GPC4O75487 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC4O75487 TP73-AS1-210ENST00000637775 1455 ntBASIC17.35■□□□□ 0.37
GPC4O75487 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 AL121761.2-201ENST00000598007 1648 ntBASIC17.35■□□□□ 0.37
GPC4O75487 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.35■□□□□ 0.37
GPC4O75487 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GPC4O75487 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GPC4O75487 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GPC4O75487 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
GPC4O75487 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GPC4O75487 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC4O75487 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.34■□□□□ 0.37
GPC4O75487 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GPC4O75487 FAM220CP-201ENST00000395253 831 ntBASIC17.34■□□□□ 0.37
GPC4O75487 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms