Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
TRIM3O75382 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM3O75382 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM3O75382 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM3O75382 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 AL162727.3-201ENST00000635661 2787 ntBASIC16.16■□□□□ 0.18
TRIM3O75382 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM3O75382 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM3O75382 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TRIM3O75382 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM3O75382 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRIM3O75382 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM3O75382 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 RBM17P3-201ENST00000417687 1192 ntBASIC16.16■□□□□ 0.18
TRIM3O75382 ABCD1P5-201ENST00000445663 754 ntBASIC16.16■□□□□ 0.18
TRIM3O75382 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.16■□□□□ 0.18
TRIM3O75382 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM3O75382 AL160237.2-201ENST00000556165 472 ntBASIC16.16■□□□□ 0.18
TRIM3O75382 AP001269.4-201ENST00000609611 512 ntBASIC16.16■□□□□ 0.18
TRIM3O75382 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
TRIM3O75382 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.16■□□□□ 0.18
TRIM3O75382 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM3O75382 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRIM3O75382 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM3O75382 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM3O75382 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM3O75382 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM3O75382 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM3O75382 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM3O75382 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 AL121761.2-201ENST00000598007 1648 ntBASIC16.15■□□□□ 0.18
TRIM3O75382 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM3O75382 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM3O75382 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM3O75382 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.14■□□□□ 0.18
TRIM3O75382 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM3O75382 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM3O75382 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIM3O75382 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms