Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 AC005915.1-201ENST00000624912 2018 ntBASIC15.27■□□□□ 0.03
NPIPB4C9JG80 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPB4C9JG80 AC106886.4-201ENST00000623557 2502 ntBASIC15.26■□□□□ 0.03
NPIPB4C9JG80 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.26■□□□□ 0.03
NPIPB4C9JG80 AC092068.3-201ENST00000587894 2016 ntBASIC15.26■□□□□ 0.03
NPIPB4C9JG80 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 AC091304.2-201ENST00000564639 760 ntBASIC15.26■□□□□ 0.03
NPIPB4C9JG80 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 NKAPP1-205ENST00000585790 367 ntBASIC15.26■□□□□ 0.03
NPIPB4C9JG80 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPB4C9JG80 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 AL021920.2-201ENST00000624828 1351 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 AC011676.5-201ENST00000624864 2660 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 FGFR3P6-201ENST00000457012 610 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 AL139424.1-201ENST00000607572 797 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 AL732292.2-201ENST00000609649 430 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 AGGF1P2-201ENST00000426656 2106 ntBASIC15.25■□□□□ 0.03
NPIPB4C9JG80 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPB4C9JG80 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 FZD10-202ENST00000539839 3282 ntBASIC15.24■□□□□ 0.03
NPIPB4C9JG80 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPB4C9JG80 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms