Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL353593.2-201ENST00000602529 1483 ntBASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 RPS2P1-201ENST00000434010 821 ntBASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.33■□□□□ 0.85
PTPDC1A2A3K4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
PTPDC1A2A3K4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 RPS2P28-201ENST00000314255 741 ntBASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 AC139887.3-201ENST00000568585 713 ntBASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 AL139288.1-201ENST00000623748 933 ntBASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 AC060834.1-201ENST00000443027 2032 ntBASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPDC1A2A3K4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 AP000867.4-201ENST00000641616 219 ntBASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PTPDC1A2A3K4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPDC1A2A3K4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms