Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AP000842.3-202ENST00000569238 1080 ntBASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
PTCH2Q9Y6C5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 TP53TG3HP-202ENST00000569755 579 ntBASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTCH2Q9Y6C5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTCH2Q9Y6C5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 RPS2P32-201ENST00000439199 892 ntBASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AC017083.2-201ENST00000608069 979 ntBASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AC138969.3-201ENST00000546612 1459 ntBASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AC138932.2-201ENST00000548268 1459 ntBASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 AC126755.4-201ENST00000549796 1459 ntBASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTCH2Q9Y6C5 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 AC027307.2-201ENST00000591252 911 ntBASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 SPDYE12P-201ENST00000618416 771 ntBASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 AC008267.7-201ENST00000624570 1194 ntBASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTCH2Q9Y6C5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 WIZP1-201ENST00000531444 2299 ntBASIC19.31■□□□□ 0.68
PTCH2Q9Y6C5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms