Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PCDHGB6Q9Y5F9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AL162727.3-201ENST00000635661 2787 ntBASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 SCARNA2-201ENST00000458748 420 ntBASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 RNA5SP419-201ENST00000515908 135 ntBASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TP73-AS1-207ENST00000624167 988 ntBASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AC097374.2-201ENST00000618617 1306 ntBASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PCDHGB6Q9Y5F9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB6Q9Y5F9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB6Q9Y5F9 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB6Q9Y5F9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PCDHGB6Q9Y5F9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.39■□□□□ 0.22
PCDHGB6Q9Y5F9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AP001094.4-201ENST00000579008 2176 ntBASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AC112698.1-201ENST00000510299 916 ntBASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PCDHGB6Q9Y5F9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDHGB6Q9Y5F9 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms