Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 AC129492.6-201ENST00000611383 1305 ntBASIC20.74■□□□□ 0.91
SALL1Q9NSC2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 AL078644.1-201ENST00000609881 752 ntBASIC20.74■□□□□ 0.91
SALL1Q9NSC2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SALL1Q9NSC2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 AC254562.1-201ENST00000417586 456 ntBASIC20.73■□□□□ 0.91
SALL1Q9NSC2 RPS8P6-201ENST00000426177 609 ntBASIC20.73■□□□□ 0.91
SALL1Q9NSC2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 AC107918.2-201ENST00000530817 355 ntBASIC20.73■□□□□ 0.91
SALL1Q9NSC2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SALL1Q9NSC2 AC108860.2-201ENST00000562760 2183 ntBASIC20.72■□□□□ 0.91
SALL1Q9NSC2 AC141586.5-201ENST00000624546 2050 ntBASIC20.72■□□□□ 0.91
SALL1Q9NSC2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.72■□□□□ 0.91
SALL1Q9NSC2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 AL138688.1-201ENST00000624851 1594 ntBASIC20.72■□□□□ 0.91
SALL1Q9NSC2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SALL1Q9NSC2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 ACTG1P14-201ENST00000446382 1122 ntBASIC20.71■□□□□ 0.91
SALL1Q9NSC2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.71■□□□□ 0.91
SALL1Q9NSC2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms