Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.24■□□□□ 0.51
CD248Q9HCU0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 AC011467.2-201ENST00000598425 242 ntBASIC18.24■□□□□ 0.51
CD248Q9HCU0 AP001269.4-201ENST00000609611 512 ntBASIC18.24■□□□□ 0.51
CD248Q9HCU0 AF228730.7-201ENST00000641842 219 ntBASIC18.24■□□□□ 0.51
CD248Q9HCU0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CD248Q9HCU0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.24■□□□□ 0.51
CD248Q9HCU0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 AC243591.1-201ENST00000452967 1364 ntBASIC18.23■□□□□ 0.51
CD248Q9HCU0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 MIR574-201ENST00000385209 96 ntBASIC18.23■□□□□ 0.51
CD248Q9HCU0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CD248Q9HCU0 HYMAI-201ENST00000635591 3347 ntBASIC18.23■□□□□ 0.51
CD248Q9HCU0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 LINC02199-201ENST00000506655 2702 ntBASIC18.23■□□□□ 0.51
CD248Q9HCU0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 CROCCP2-202ENST00000412962 2773 ntBASIC18.23■□□□□ 0.51
CD248Q9HCU0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CD248Q9HCU0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.23■□□□□ 0.51
CD248Q9HCU0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 RBM17P3-201ENST00000417687 1192 ntBASIC18.22■□□□□ 0.51
CD248Q9HCU0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.22■□□□□ 0.51
CD248Q9HCU0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 AC009533.2-201ENST00000543664 586 ntBASIC18.22■□□□□ 0.51
CD248Q9HCU0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 MIR7706-201ENST00000613747 67 ntBASIC18.22■□□□□ 0.51
CD248Q9HCU0 LINC00602-201ENST00000629776 2065 ntBASIC18.22■□□□□ 0.51
CD248Q9HCU0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CD248Q9HCU0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CD248Q9HCU0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CD248Q9HCU0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CD248Q9HCU0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms