Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.63■□□□□ 0.57
LRCH3Q96II8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCH3Q96II8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC098614.1-201ENST00000368528 745 ntBASIC18.62■□□□□ 0.57
LRCH3Q96II8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC120057.1-201ENST00000483947 663 ntBASIC18.62■□□□□ 0.57
LRCH3Q96II8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 KRT8P23-201ENST00000560090 1207 ntBASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC005082.1-201ENST00000413042 2259 ntBASIC18.62■□□□□ 0.57
LRCH3Q96II8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 AC009113.1-201ENST00000570267 2443 ntBASIC18.62■□□□□ 0.57
LRCH3Q96II8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.62■□□□□ 0.57
LRCH3Q96II8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCH3Q96II8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 AL512384.1-201ENST00000406683 331 ntBASIC18.61■□□□□ 0.57
LRCH3Q96II8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 LINC00982-205ENST00000420957 435 ntBASIC18.61■□□□□ 0.57
LRCH3Q96II8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 LINC01225-203ENST00000563550 1244 ntBASIC18.61■□□□□ 0.57
LRCH3Q96II8 RARRES2P8-201ENST00000566335 367 ntBASIC18.61■□□□□ 0.57
LRCH3Q96II8 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRCH3Q96II8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRCH3Q96II8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRCH3Q96II8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
LRCH3Q96II8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH3Q96II8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRCH3Q96II8 AC007541.1-201ENST00000570282 1469 ntBASIC18.59■□□□□ 0.57
LRCH3Q96II8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRCH3Q96II8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms