Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 PCDHA1-201ENST00000378133 2726 ntBASIC16.48■□□□□ 0.23
LRRC58Q96CX6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 AP003733.1-201ENST00000491725 852 ntBASIC16.48■□□□□ 0.23
LRRC58Q96CX6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 MIR4497-201ENST00000583208 89 ntBASIC16.48■□□□□ 0.23
LRRC58Q96CX6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 AC140113.3-201ENST00000605663 199 ntBASIC16.48■□□□□ 0.23
LRRC58Q96CX6 AC019129.2-201ENST00000609837 1235 ntBASIC16.48■□□□□ 0.23
LRRC58Q96CX6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LRRC58Q96CX6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 FAM8A6P-201ENST00000407496 1135 ntBASIC16.47■□□□□ 0.23
LRRC58Q96CX6 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 AC109462.3-201ENST00000573934 613 ntBASIC16.47■□□□□ 0.23
LRRC58Q96CX6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 AL662844.4-201ENST00000606367 2838 ntBASIC16.47■□□□□ 0.23
LRRC58Q96CX6 LINC01568-207ENST00000641790 1380 ntBASIC16.47■□□□□ 0.23
LRRC58Q96CX6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.47■□□□□ 0.23
LRRC58Q96CX6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRC58Q96CX6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.46■□□□□ 0.23
LRRC58Q96CX6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRC58Q96CX6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms