Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 KLF4P1-201ENST00000412782 1185 ntBASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 KRT16P4-201ENST00000453883 522 ntBASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 AP000867.4-201ENST00000641616 219 ntBASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 PMPCAP1-201ENST00000508114 1576 ntBASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TTC9CQ8N5M4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TNRC18P3-201ENST00000441896 2691 ntBASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 AC093525.9-201ENST00000624961 1746 ntBASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TTC9CQ8N5M4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TTC9CQ8N5M4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms