Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 AC233702.3-201ENST00000578656 1387 ntBASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00346Q8IVM7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LINC00346Q8IVM7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 AP002383.4-201ENST00000442518 975 ntBASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 TOB2P1-201ENST00000469761 992 ntBASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 AC009533.2-201ENST00000543664 586 ntBASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 TPSP2-201ENST00000561760 610 ntBASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 AP002414.4-201ENST00000589764 1148 ntBASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.33■□□□□ 0.04
LINC00346Q8IVM7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 LINC00265-3P-201ENST00000447588 903 ntBASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 MINOS1P3-201ENST00000457048 203 ntBASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00346Q8IVM7 LINC02012-201ENST00000608206 1725 ntBASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00346Q8IVM7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms