Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL23A1Q86Y22 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.03
COL23A1Q86Y22 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 RNU1-129P-201ENST00000384064 167 ntBASIC21.45■■□□□ 1.02
COL23A1Q86Y22 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 RARRES2P9-201ENST00000565168 469 ntBASIC21.45■■□□□ 1.02
COL23A1Q86Y22 U1.21-201ENST00000580816 167 ntBASIC21.45■■□□□ 1.02
COL23A1Q86Y22 AL139327.4-201ENST00000612362 153 ntBASIC21.45■■□□□ 1.02
COL23A1Q86Y22 GPER1-207ENST00000619052 571 ntTSL 2 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
COL23A1Q86Y22 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AP3S2-216ENST00000617003 1561 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AC016027.1-202ENST00000607927 1699 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AC098614.1-201ENST00000368528 745 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 DGCR5-201ENST00000399539 862 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AL353779.1-201ENST00000434793 351 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ACA64.2-201ENST00000459014 129 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 HLA-V-204ENST00000476601 1289 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AC007967.4-201ENST00000614700 386 ntBASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL23A1Q86Y22 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 AC142381.1-201ENST00000426099 345 ntBASIC21.43■■□□□ 1.02
COL23A1Q86Y22 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 AC140912.1-201ENST00000577171 1054 ntBASIC21.43■■□□□ 1.02
COL23A1Q86Y22 AL031055.1-201ENST00000606362 631 ntBASIC21.43■■□□□ 1.02
COL23A1Q86Y22 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 AIRN-201ENST00000601203 4374 ntBASIC21.43■■□□□ 1.02
COL23A1Q86Y22 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 REXO1L9P-201ENST00000604264 2108 ntBASIC21.43■■□□□ 1.02
COL23A1Q86Y22 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.43■■□□□ 1.02
COL23A1Q86Y22 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL23A1Q86Y22 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms