Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.21■□□□□ 0.67
SWSAP1Q6NVH7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 AC090340.1-201ENST00000620778 4980 ntBASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 AC139530.3-201ENST00000620344 690 ntBASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.2■□□□□ 0.66
SWSAP1Q6NVH7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AL138688.1-201ENST00000624851 1594 ntBASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AC004832.2-201ENST00000426397 482 ntBASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AC002347.1-201ENST00000569543 541 ntBASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 AC010327.4-202ENST00000591484 748 ntBASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SWSAP1Q6NVH7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 AC112482.1-201ENST00000492080 688 ntBASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 AL513190.1-201ENST00000621254 727 ntBASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 AC010507.1-201ENST00000633895 436 ntBASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.18■□□□□ 0.66
SWSAP1Q6NVH7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 AC016396.2-201ENST00000562575 1417 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 RNF165-205ENST00000588679 2904 ntBASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SWSAP1Q6NVH7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms