Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LINC01126-201ENST00000623515 1646 ntBASIC18.04■□□□□ 0.48
IRX4P78413 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.04■□□□□ 0.48
IRX4P78413 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
IRX4P78413 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IRX4P78413 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
IRX4P78413 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
IRX4P78413 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
IRX4P78413 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
IRX4P78413 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.03■□□□□ 0.48
IRX4P78413 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
IRX4P78413 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
IRX4P78413 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 MTDHP3-201ENST00000594186 672 ntBASIC18.03■□□□□ 0.48
IRX4P78413 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
IRX4P78413 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.03■□□□□ 0.48
IRX4P78413 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
IRX4P78413 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.02■□□□□ 0.48
IRX4P78413 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
IRX4P78413 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
IRX4P78413 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.02■□□□□ 0.48
IRX4P78413 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.02■□□□□ 0.48
IRX4P78413 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.02■□□□□ 0.48
IRX4P78413 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.02■□□□□ 0.48
IRX4P78413 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.02■□□□□ 0.48
IRX4P78413 FGFR3P6-201ENST00000457012 610 ntBASIC18.02■□□□□ 0.48
IRX4P78413 PGAM5P1-201ENST00000518923 814 ntBASIC18.02■□□□□ 0.48
IRX4P78413 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IRX4P78413 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IRX4P78413 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.02■□□□□ 0.47
IRX4P78413 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.02■□□□□ 0.47
IRX4P78413 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IRX4P78413 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IRX4P78413 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 AC093010.1-201ENST00000473625 1624 ntBASIC18.01■□□□□ 0.47
IRX4P78413 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
IRX4P78413 RPS2P28-201ENST00000314255 741 ntBASIC18.01■□□□□ 0.47
IRX4P78413 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.01■□□□□ 0.47
IRX4P78413 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.01■□□□□ 0.47
IRX4P78413 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IRX4P78413 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
IRX4P78413 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms