Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR2AP24928 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
POLR2AP24928 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2AP24928 SPTLC1P1-201ENST00000447199 261 ntBASIC20.05■□□□□ 0.8
POLR2AP24928 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.05■□□□□ 0.8
POLR2AP24928 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
POLR2AP24928 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.05■□□□□ 0.8
POLR2AP24928 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.05■□□□□ 0.8
POLR2AP24928 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2AP24928 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
POLR2AP24928 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR2AP24928 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.05■□□□□ 0.8
POLR2AP24928 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR2AP24928 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR2AP24928 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR2AP24928 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 AL139327.4-201ENST00000612362 153 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 AC004790.1-201ENST00000612686 536 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR2AP24928 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.04■□□□□ 0.8
POLR2AP24928 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 HCG4-201ENST00000418983 998 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR2AP24928 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 AC009477.1-201ENST00000452936 217 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 AC105233.2-201ENST00000523697 349 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 AF228730.5-201ENST00000530288 346 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.04■□□□□ 0.8
POLR2AP24928 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.04■□□□□ 0.8
POLR2AP24928 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 AC008738.7-201ENST00000609744 511 ntBASIC20.04■□□□□ 0.8
POLR2AP24928 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
POLR2AP24928 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2AP24928 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2AP24928 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
POLR2AP24928 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.03■□□□□ 0.8
POLR2AP24928 AC017083.2-201ENST00000608069 979 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 LINC01451-201ENST00000623792 534 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
POLR2AP24928 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
POLR2AP24928 AC093503.3-201ENST00000624917 2352 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2AP24928 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
POLR2AP24928 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2AP24928 AC131009.4-201ENST00000624048 1740 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 MIR346-201ENST00000362234 95 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2AP24928 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2AP24928 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2AP24928 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.03■□□□□ 0.8
POLR2AP24928 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2AP24928 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.03■□□□□ 0.8
POLR2AP24928 AC109635.5-201ENST00000533593 962 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 BANF1P1-201ENST00000553684 263 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.03■□□□□ 0.8
POLR2AP24928 AC007967.4-201ENST00000614700 386 ntBASIC20.03■□□□□ 0.8
POLR2AP24928 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2AP24928 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
POLR2AP24928 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
POLR2AP24928 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
POLR2AP24928 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2AP24928 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2AP24928 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
POLR2AP24928 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2AP24928 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.02■□□□□ 0.8
POLR2AP24928 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.02■□□□□ 0.8
POLR2AP24928 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.02■□□□□ 0.8
POLR2AP24928 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.02■□□□□ 0.8
POLR2AP24928 TEX28P1-201ENST00000613479 1221 ntBASIC20.02■□□□□ 0.8
POLR2AP24928 TEX28P2-201ENST00000617764 1221 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms