Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.87■□□□□ 0.93
COL11A2P13942 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
COL11A2P13942 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL11A2P13942 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.87■□□□□ 0.93
COL11A2P13942 IGHV3-71-201ENST00000523324 359 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 CR383656.12-201ENST00000549567 513 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 AL138918.1-201ENST00000568306 659 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 AC091167.2-201ENST00000579581 588 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 AC008738.7-201ENST00000609744 511 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 SLC25A24-204ENST00000569674 2357 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COL11A2P13942 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.87■□□□□ 0.93
COL11A2P13942 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 ATP5G2P4-201ENST00000442175 420 ntBASIC20.87■□□□□ 0.93
COL11A2P13942 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.87■□□□□ 0.93
COL11A2P13942 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.87■□□□□ 0.93
COL11A2P13942 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.87■□□□□ 0.93
COL11A2P13942 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.87■□□□□ 0.93
COL11A2P13942 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL11A2P13942 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
COL11A2P13942 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.86■□□□□ 0.93
COL11A2P13942 AL512638.1-201ENST00000457493 794 ntBASIC20.86■□□□□ 0.93
COL11A2P13942 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.86■□□□□ 0.93
COL11A2P13942 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.86■□□□□ 0.93
COL11A2P13942 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 HILS1-202ENST00000545329 423 ntBASIC20.86■□□□□ 0.93
COL11A2P13942 RARRES2P9-201ENST00000565168 469 ntBASIC20.86■□□□□ 0.93
COL11A2P13942 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 MIR6752-201ENST00000618442 71 ntBASIC20.86■□□□□ 0.93
COL11A2P13942 CU639417.3-201ENST00000624240 1404 ntBASIC20.86■□□□□ 0.93
COL11A2P13942 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL11A2P13942 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
COL11A2P13942 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL11A2P13942 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL11A2P13942 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
COL11A2P13942 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL11A2P13942 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.85■□□□□ 0.93
COL11A2P13942 AL080243.2-201ENST00000418783 582 ntBASIC20.85■□□□□ 0.93
COL11A2P13942 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.85■□□□□ 0.93
COL11A2P13942 TEX28P1-201ENST00000613479 1221 ntBASIC20.85■□□□□ 0.93
COL11A2P13942 TEX28P2-201ENST00000617764 1221 ntBASIC20.85■□□□□ 0.93
COL11A2P13942 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.85■□□□□ 0.93
COL11A2P13942 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
COL11A2P13942 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.85■□□□□ 0.93
COL11A2P13942 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.85■□□□□ 0.93
COL11A2P13942 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.85■□□□□ 0.93
COL11A2P13942 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 EGFEM1P-202ENST00000431685 1563 ntBASIC20.85■□□□□ 0.93
COL11A2P13942 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COL11A2P13942 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL11A2P13942 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.84■□□□□ 0.93
COL11A2P13942 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 AP000974.1-201ENST00000623909 2387 ntBASIC20.84■□□□□ 0.93
COL11A2P13942 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL11A2P13942 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms