Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CHRNB1P11230 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNB1P11230 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNB1P11230 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CHRNB1P11230 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.47■□□□□ 0.39
CHRNB1P11230 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
CHRNB1P11230 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNB1P11230 AC129492.6-201ENST00000611383 1305 ntBASIC17.47■□□□□ 0.39
CHRNB1P11230 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNB1P11230 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNB1P11230 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNB1P11230 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.46■□□□□ 0.39
CHRNB1P11230 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNB1P11230 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.46■□□□□ 0.39
CHRNB1P11230 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNB1P11230 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.46■□□□□ 0.39
CHRNB1P11230 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CHRNB1P11230 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CHRNB1P11230 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CHRNB1P11230 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNB1P11230 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.46■□□□□ 0.38
CHRNB1P11230 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CHRNB1P11230 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CHRNB1P11230 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 AL135999.2-201ENST00000622438 1686 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CHRNB1P11230 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
CHRNB1P11230 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRNB1P11230 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CHRNB1P11230 AC005237.2-201ENST00000434368 219 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 AC140658.5-201ENST00000438532 169 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 SPDYE11-202ENST00000450699 704 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 AC087163.2-201ENST00000457299 853 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.45■□□□□ 0.38
CHRNB1P11230 AC190387.1-201ENST00000551683 408 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 SPDYE9P-201ENST00000570642 692 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 SPDYE10P-202ENST00000612005 668 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 SPDYE8P-202ENST00000612377 668 ntBASIC17.45■□□□□ 0.38
CHRNB1P11230 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNB1P11230 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CHRNB1P11230 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.45■□□□□ 0.38
CHRNB1P11230 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CHRNB1P11230 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.45■□□□□ 0.38
CHRNB1P11230 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CHRNB1P11230 AC012313.1-201ENST00000593393 3059 ntBASIC17.44■□□□□ 0.38
CHRNB1P11230 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB1P11230 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB1P11230 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB1P11230 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.44■□□□□ 0.38
CHRNB1P11230 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNB1P11230 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CHRNB1P11230 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNB1P11230 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.44■□□□□ 0.38
CHRNB1P11230 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms