Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.13■□□□□ 0.49
TRUB2O95900 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.13■□□□□ 0.49
TRUB2O95900 AC073648.2-201ENST00000510116 352 ntBASIC18.13■□□□□ 0.49
TRUB2O95900 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.13■□□□□ 0.49
TRUB2O95900 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.13■□□□□ 0.49
TRUB2O95900 AC025062.2-201ENST00000605477 670 ntBASIC18.13■□□□□ 0.49
TRUB2O95900 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 PCDHA12-202ENST00000613593 2588 ntBASIC18.13■□□□□ 0.49
TRUB2O95900 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.13■□□□□ 0.49
TRUB2O95900 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TRUB2O95900 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRUB2O95900 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB2O95900 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB2O95900 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRUB2O95900 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRUB2O95900 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRUB2O95900 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB2O95900 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 KRT18P67-201ENST00000432816 1264 ntBASIC18.12■□□□□ 0.49
TRUB2O95900 AC009078.2-202ENST00000463353 338 ntBASIC18.12■□□□□ 0.49
TRUB2O95900 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 AF186996.4-201ENST00000467186 377 ntBASIC18.12■□□□□ 0.49
TRUB2O95900 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB2O95900 AL135999.2-201ENST00000622438 1686 ntBASIC18.12■□□□□ 0.49
TRUB2O95900 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRUB2O95900 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB2O95900 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 MRPL3P1-201ENST00000400109 1033 ntBASIC18.11■□□□□ 0.49
TRUB2O95900 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.11■□□□□ 0.49
TRUB2O95900 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.11■□□□□ 0.49
TRUB2O95900 AC018712.1-201ENST00000455767 687 ntBASIC18.11■□□□□ 0.49
TRUB2O95900 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.11■□□□□ 0.49
TRUB2O95900 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.11■□□□□ 0.49
TRUB2O95900 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRUB2O95900 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB2O95900 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRUB2O95900 AC148477.8-201ENST00000624298 468 ntBASIC18.11■□□□□ 0.49
TRUB2O95900 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB2O95900 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB2O95900 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRUB2O95900 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB2O95900 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB2O95900 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms