Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.21■□□□□ 0.67
CLSTN1O94985 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.21■□□□□ 0.67
CLSTN1O94985 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.21■□□□□ 0.67
CLSTN1O94985 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.21■□□□□ 0.67
CLSTN1O94985 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.21■□□□□ 0.67
CLSTN1O94985 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLSTN1O94985 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CLSTN1O94985 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CLSTN1O94985 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLSTN1O94985 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.2■□□□□ 0.66
CLSTN1O94985 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLSTN1O94985 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 KRT18P55-202ENST00000578578 1546 ntBASIC19.2■□□□□ 0.66
CLSTN1O94985 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 AC233702.3-201ENST00000578656 1387 ntBASIC19.2■□□□□ 0.66
CLSTN1O94985 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CLSTN1O94985 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 PRELID1P1-202ENST00000567272 903 ntBASIC19.2■□□□□ 0.66
CLSTN1O94985 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 AC099336.1-202ENST00000602961 463 ntBASIC19.2■□□□□ 0.66
CLSTN1O94985 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.2■□□□□ 0.66
CLSTN1O94985 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLSTN1O94985 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.2■□□□□ 0.66
CLSTN1O94985 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CLSTN1O94985 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CLSTN1O94985 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLSTN1O94985 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLSTN1O94985 NUS1P2-201ENST00000417358 873 ntBASIC19.19■□□□□ 0.66
CLSTN1O94985 ATP5G2P1-201ENST00000433580 426 ntBASIC19.19■□□□□ 0.66
CLSTN1O94985 RN7SL606P-201ENST00000472779 293 ntBASIC19.19■□□□□ 0.66
CLSTN1O94985 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 NPAP1P7-201ENST00000613027 823 ntBASIC19.19■□□□□ 0.66
CLSTN1O94985 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CLSTN1O94985 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLSTN1O94985 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.19■□□□□ 0.66
CLSTN1O94985 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
CLSTN1O94985 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.19■□□□□ 0.66
CLSTN1O94985 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLSTN1O94985 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CLSTN1O94985 AC099398.1-201ENST00000567919 2776 ntBASIC19.18■□□□□ 0.66
CLSTN1O94985 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CLSTN1O94985 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CLSTN1O94985 DRAXINP1-201ENST00000437611 948 ntBASIC19.18■□□□□ 0.66
CLSTN1O94985 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.18■□□□□ 0.66
CLSTN1O94985 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.18■□□□□ 0.66
CLSTN1O94985 KRT17P6-201ENST00000453795 1220 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms