Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM49D1C9J1S8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 AC007967.3-201ENST00000434308 558 ntBASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 KRT18P38-201ENST00000449496 1282 ntBASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 VENTXP5-201ENST00000523979 775 ntBASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 AC124947.2-201ENST00000547118 1133 ntBASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM49D1C9J1S8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 AC008894.3-201ENST00000624324 3103 ntBASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 RNF126P1-202ENST00000569893 925 ntBASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 Z83836.1-201ENST00000624605 1642 ntBASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TRIM49D1C9J1S8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms