Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SSX2IPQ9Y2D8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 AC005829.1-201ENST00000570002 483 ntBASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 STK25P1-201ENST00000585406 838 ntBASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SSX2IPQ9Y2D8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 AC108073.2-201ENST00000464002 357 ntBASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 GGTLC5P-201ENST00000617623 998 ntBASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 AC148477.5-201ENST00000625164 1645 ntBASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SSX2IPQ9Y2D8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 GPR89P-201ENST00000407924 1495 ntBASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 PMS2P2-201ENST00000425039 1128 ntBASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 KRT18P2-201ENST00000447938 1258 ntBASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 AL805961.1-202ENST00000641562 540 ntBASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SSX2IPQ9Y2D8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms