Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 AL353135.1-201ENST00000606729 504 ntBASIC14.4□□□□□ -0.1
GAFA1Q96PS6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
GAFA1Q96PS6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 EGFEM1P-202ENST00000431685 1563 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 RPS2P1-201ENST00000434010 821 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AC018712.1-201ENST00000455767 687 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AF186996.4-201ENST00000467186 377 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 OR7E14P-202ENST00000530490 1290 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AL160237.2-201ENST00000556165 472 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AL121894.2-201ENST00000602977 491 ntBASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GAFA1Q96PS6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 LAGE3P1-201ENST00000425356 484 ntBASIC14.38□□□□□ -0.11
GAFA1Q96PS6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 AL139424.1-201ENST00000607572 797 ntBASIC14.38□□□□□ -0.11
GAFA1Q96PS6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 AC148477.8-201ENST00000624298 468 ntBASIC14.38□□□□□ -0.11
GAFA1Q96PS6 AC107918.4-202ENST00000641623 219 ntBASIC14.38□□□□□ -0.11
GAFA1Q96PS6 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.38□□□□□ -0.11
GAFA1Q96PS6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GAFA1Q96PS6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms