Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RAB42Q8N4Z0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB42Q8N4Z0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB42Q8N4Z0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB42Q8N4Z0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 RPS2P28-201ENST00000314255 741 ntBASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 AF186996.4-201ENST00000467186 377 ntBASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 BX005266.1-201ENST00000473402 457 ntBASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 NKAPP1-205ENST00000585790 367 ntBASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 FER1L4-210ENST00000615531 5998 ntBASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB42Q8N4Z0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB42Q8N4Z0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms