Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 AC079781.3-201ENST00000449110 356 ntBASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PRICKLE4Q2TBC4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 AC080080.1-201ENST00000625121 2420 ntBASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 FAAHP1-202ENST00000446499 1238 ntBASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 AC139887.3-201ENST00000568585 713 ntBASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 AC092053.1-201ENST00000605787 1936 ntBASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PRICKLE4Q2TBC4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
PRICKLE4Q2TBC4 AC020916.1-201ENST00000587762 1774 ntBASIC16.08■□□□□ 0.17
PRICKLE4Q2TBC4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PRICKLE4Q2TBC4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 FAM197Y8-203ENST00000450145 560 ntBASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 RNPS1P1-201ENST00000507437 918 ntBASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 AC073648.2-201ENST00000510116 352 ntBASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 AL139424.1-201ENST00000607572 797 ntBASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 AL031008.1-201ENST00000619963 541 ntBASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 AL590787.1-201ENST00000568856 1315 ntBASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PRICKLE4Q2TBC4 GPR89P-201ENST00000407924 1495 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms